Lab schedule – EEB 5348 – Population Genetics

Date	Lab	Links
29 August	Introduction to R	Getting started with `R` CRAN - the Comprehensive `R` Archive Network RStudio downloads
5 September	F-statistics with `hierfstat` and `Hickory`	HTML `R` Markdown
12 September	Project #1 Individual assignment with `Structure`	HTML R markdown You may find this paper on not overinterpreting STRUCTURE results useful. A tutorial on how not to over-interpret STRUCTURE and ADMIXTURE barplots
19 September	Exploring natural selection	HTML `R` Markdown
26 Septebmer	Exploring the properties of genetic drift	HTML `R` Markdown
3 October	Drift with migration and mutation	HTML `R` Markdown
10 October	Exploring the coalescent	HTML `R` Markdown
17 October	Project # 2	HTML R markdown
24 October	Comparing expected coalescent times to observed coalescent times	HTML `R` Markdown
31 October	Tajima's D	HTML `R` Markdown
7 November	Project #3	HTML `R` Markdown
14 November	Resemblance among relatives and partitioning phenotypic variance	HTML `R` Markdown
21 November	Thanksgiving break	No Lab! Did you think I was going to make a lab assignment on Thanksgiving Break?
28 November	GWAS - initial analysis	Yes, I posted this lab Wednesday evening before Thanksgiving, but that doesn't mean you need to look at it now. You can wait until Monday morning, when I send you an email about it. HTML `R` Markdown
5 December	GWAS - consolidated analysis and interpretation of the results	HTML `R` Markdown