{"id":558,"date":"2021-10-24T18:15:19","date_gmt":"2021-10-24T18:15:19","guid":{"rendered":"http:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/?p=558"},"modified":"2021-10-24T18:15:19","modified_gmt":"2021-10-24T18:15:19","slug":"coalescence-and-self-incompatibility","status":"publish","type":"post","link":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/2021\/10\/24\/coalescence-and-self-incompatibility\/","title":{"rendered":"Coalescence and self-incompatibility"},"content":{"rendered":"\n<p class=\"has-drop-cap\">Lab 9 is now posted. As usual, you can find it from the <a href=\"http:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/lab-schedule\/\" data-type=\"URL\" data-id=\"http:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/lab-schedule\/\">Lab Schedule<\/a> page or from the direct link below. Although there is a little simulation this week, there&#8217;s only one simulation, and it runs pretty quickly (4-5 seconds) on my laptop). As with Project #2, the emphasis here is on interpreting the results. If you&#8217;d like an overview of sRNases (the proteins produced by the loci used in this exercise), the Igic and Kohn paper below is a bit old (OK, two decades old), but it provides a good overview of the phenomena.<\/p>\n\n\n\n<ul class=\"wp-block-list\"><li>Comparing simulated and &#8220;observed&#8221; coalescent times<\/li><\/ul>\n\n\n\n<p>Igic, B., and J.R. Kohn.  2021. Evolutionary relationships among self-incompatibility RNases. <em>Proceedings of the National Academy of Sciences USA<\/em>  98:13167-13171. doi: <a href=\"https:\/\/dx.doi.org\/10.1073\/pnas.231386798\" data-type=\"URL\" data-id=\"https:\/\/dx.doi.org\/10.1073\/pnas.231386798\">10.1073\/pnas.231386798<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Lab 9 is now posted. As usual, you can find it from the Lab Schedule page or from the direct link below. Although there is a little simulation this week, there&#8217;s only one simulation, and it runs pretty quickly (4-5 seconds) on my laptop). As with Project #2, the emphasis here is on interpreting the &hellip; <\/p>\n<p class=\"link-more\"><a href=\"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/2021\/10\/24\/coalescence-and-self-incompatibility\/\" class=\"more-link\">Continue reading<span class=\"screen-reader-text\"> &#8220;Coalescence and self-incompatibility&#8221;<\/span><\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[1],"tags":[],"class_list":["post-558","post","type-post","status-publish","format-standard","hentry","category-uncategorized"],"_links":{"self":[{"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/posts\/558","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/comments?post=558"}],"version-history":[{"count":2,"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/posts\/558\/revisions"}],"predecessor-version":[{"id":560,"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/posts\/558\/revisions\/560"}],"wp:attachment":[{"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/media?parent=558"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/categories?post=558"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/tags?post=558"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}