{"id":472,"date":"2021-08-03T08:48:00","date_gmt":"2021-08-03T08:48:00","guid":{"rendered":"http:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/?p=472"},"modified":"2021-07-31T20:57:27","modified_gmt":"2021-07-31T20:57:27","slug":"two-weeks-worth-of-updates-on-lecture-notes","status":"publish","type":"post","link":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/2021\/08\/03\/two-weeks-worth-of-updates-on-lecture-notes\/","title":{"rendered":"Two weeks worth of updates on lecture notes"},"content":{"rendered":"\n<p class=\"has-drop-cap\">I revised some notes last weekend and posted them to the lecture detail pages on the course website, but I didn&#8217;t make a note of that here. This weekend I revised some more. The result is that there&#8217;s a pretty long list of additions &#8211; all the way from the coalescent through AMOVA. With a little luck, the notes on statistical phylogeography and population genomics will be done by next week. Because I&#8217;ll be really busy once the semester begins, I&#8217;m doing my best to get all of the notes revised <em><strong>before<\/strong><\/em> the semester begins. That way I can focus on lab exercises once the semester starts.<\/p>\n\n\n\n<ul class=\"wp-block-list\"><li>The coalescent (<a href=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/coalescent.html\" data-type=\"URL\" data-id=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/coalescent.html\">HTML<\/a>) (<a href=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/coalescent.pdf\" data-type=\"URL\" data-id=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/coalescent.pdf\">PDF<\/a>)<\/li><li>Introduction to molecular evolution (<a href=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/molevol-intro.html\" data-type=\"URL\" data-id=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/molevol-intro.html\">HTML<\/a>) (<a href=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/molevol-intro.pdf\" data-type=\"URL\" data-id=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/molevol-intro.pdf\">PDF<\/a>)<\/li><li>Patterns of nucleotide and amino acid substitution (<a href=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/molevol-patterns.html\" data-type=\"URL\" data-id=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/molevol-patterns.html\">HTML<\/a>) (<a href=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/molevol-patterns.pdf\">PDF<\/a>)<\/li><li>Detecting selection on nucleotide polymorphisms (<a href=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/molevol-selection.html\" data-type=\"URL\" data-id=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/molevol-selection.html\">HTML<\/a>) (<a href=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/molevol-selection.pdf\" data-type=\"URL\" data-id=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/molevol-selection.pdf\">PDF<\/a>)<\/li><li>Analysis of molecular variance (AMOVA) (<a href=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/molevol-amova.html\" data-type=\"URL\" data-id=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/molevol-amova.html\">HTML<\/a>) (<a href=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/molevol-amova.pdf\" data-type=\"URL\" data-id=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/molevol-amova.pdf\">PDF<\/a>)<\/li><\/ul>\n","protected":false},"excerpt":{"rendered":"<p>I revised some notes last weekend and posted them to the lecture detail pages on the course website, but I didn&#8217;t make a note of that here. This weekend I revised some more. The result is that there&#8217;s a pretty long list of additions &#8211; all the way from the coalescent through AMOVA. With a &hellip; <\/p>\n<p class=\"link-more\"><a href=\"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/2021\/08\/03\/two-weeks-worth-of-updates-on-lecture-notes\/\" class=\"more-link\">Continue reading<span class=\"screen-reader-text\"> &#8220;Two weeks worth of updates on lecture notes&#8221;<\/span><\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[1],"tags":[],"class_list":["post-472","post","type-post","status-publish","format-standard","hentry","category-uncategorized"],"_links":{"self":[{"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/posts\/472","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/comments?post=472"}],"version-history":[{"count":1,"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/posts\/472\/revisions"}],"predecessor-version":[{"id":473,"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/posts\/472\/revisions\/473"}],"wp:attachment":[{"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/media?parent=472"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/categories?post=472"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/tags?post=472"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}