{"id":461,"date":"2021-07-06T08:12:00","date_gmt":"2021-07-06T08:12:00","guid":{"rendered":"http:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/?p=461"},"modified":"2021-07-05T20:21:51","modified_gmt":"2021-07-05T20:21:51","slug":"notes-on-a-bayesian-approach-for-analysis-of-f-statistics","status":"publish","type":"post","link":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/2021\/07\/06\/notes-on-a-bayesian-approach-for-analysis-of-f-statistics\/","title":{"rendered":"Notes on a Bayesian approach for analysis of F-statistics"},"content":{"rendered":"\n<p class=\"has-drop-cap\">If you follow me on Twitter or read <a href=\"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\">Uncommon Ground<\/a>, you may remember that I announced <a href=\"http:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/blog\/2020\/09\/28\/an-r-stan-implementation-of-bayesian-inference-for-wrights-f-statistics\/\" data-type=\"URL\" data-id=\"http:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/blog\/2020\/09\/28\/an-r-stan-implementation-of-bayesian-inference-for-wrights-f-statistics\/\">last September <\/a>that I&#8217;d written a new version of <tt>Hickory<\/tt> (a C++ program that Paul Lewis and I wrote) using <tt>R<\/tt> and <tt>Stan<\/tt> for Bayesian analysis of Wright&#8217;s F-statistics. This set of notes outlines the basic principle behind the approach and provides an overview of using <tt>Hickory<\/tt> for analysis of F-statistics. <tt>Hickory<\/tt> can do more than is illustrated here. If you&#8217;re interested, visit the Github page. If you&#8217;re really interested, follow the instructions there to install it as a package in <tt>R<\/tt>.<\/p>\n\n\n\n<ul class=\"wp-block-list\"><li>Analyzing the genetic structure of populations: a Bayesian approach (<a href=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/genetic-structure-bayes.html\">HTML<\/a>) (<a href=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/genetic-structure-bayes.pdf\" data-type=\"URL\" data-id=\"http:\/\/darwin.eeb.uconn.edu\/eeb348-notes\/genetic-structure-bayes.pdf\">PDF<\/a>)<\/li><\/ul>\n\n\n\n<p><\/p>\n","protected":false},"excerpt":{"rendered":"<p>If you follow me on Twitter or read Uncommon Ground, you may remember that I announced last September that I&#8217;d written a new version of Hickory (a C++ program that Paul Lewis and I wrote) using R and Stan for Bayesian analysis of Wright&#8217;s F-statistics. This set of notes outlines the basic principle behind the &hellip; <\/p>\n<p class=\"link-more\"><a href=\"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/2021\/07\/06\/notes-on-a-bayesian-approach-for-analysis-of-f-statistics\/\" class=\"more-link\">Continue reading<span class=\"screen-reader-text\"> &#8220;Notes on a Bayesian approach for analysis of F-statistics&#8221;<\/span><\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[1],"tags":[],"class_list":["post-461","post","type-post","status-publish","format-standard","hentry","category-uncategorized"],"_links":{"self":[{"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/posts\/461","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/comments?post=461"}],"version-history":[{"count":3,"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/posts\/461\/revisions"}],"predecessor-version":[{"id":464,"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/posts\/461\/revisions\/464"}],"wp:attachment":[{"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/media?parent=461"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/categories?post=461"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/tags?post=461"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}