{"id":96,"date":"2017-01-10T20:48:27","date_gmt":"2017-01-10T20:48:27","guid":{"rendered":"http:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/?page_id=96"},"modified":"2017-01-11T19:49:53","modified_gmt":"2017-01-11T19:49:53","slug":"lab-schedule","status":"publish","type":"page","link":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/lab-schedule\/","title":{"rendered":"Lab schedule"},"content":{"rendered":"\n<table id=\"tablepress-5\" class=\"tablepress tablepress-id-5\">\n<thead>\n<tr class=\"row-1 odd\">\n\t<th class=\"column-1\">Date<\/th><th class=\"column-2\">Lab<\/th><th class=\"column-3\">Links<\/th>\n<\/tr>\n<\/thead>\n<tbody class=\"row-hover\">\n<tr class=\"row-2 even\">\n\t<td class=\"column-1\">29 August<\/td><td class=\"column-2\">Introduction to R<\/td><td class=\"column-3\"><a href=\"http:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-content\/uploads\/sites\/2\/2021\/08\/getting-started-with-R.pdf\">Getting started with <tt>R<\/tt><\/a><br \/>\n<br \/><br \/>\n<a href=\"https:\/\/cran.r-project.org\/\">CRAN<\/a> - the Comprehensive <tt>R<\/tt> Archive Network<br \/>\n<br \/><br \/>\n<a href=\"https:\/\/www.rstudio.com\/products\/rstudio\/download\/#download\">RStudio downloads<\/a><br \/>\n<\/li><\/td>\n<\/tr>\n<tr class=\"row-3 odd\">\n\t<td class=\"column-1\">5 September<\/td><td class=\"column-2\"><em>F<\/em>-statistics with <tt>hierfstat<\/tt> and <tt>Hickory<\/tt><\/td><td class=\"column-3\"><ul><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Lab-2023-09-05.nb.html\">HTML<\/a><\/li><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Lab-2023-09-05.Rmd\"><tt>R<\/tt> Markdown<\/a><\/li><br \/>\n<\/ul><\/td>\n<\/tr>\n<tr class=\"row-4 even\">\n\t<td class=\"column-1\">12 September<\/td><td class=\"column-2\"><div class=\"project\">Project #1<\/div>Individual assignment with <tt>Structure<\/tt><\/td><td class=\"column-3\"><ul><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Project-1-2023.nb.html\">HTML<\/a><br \/>\n<\/li><br \/>\n<li><br \/>\n <a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Project-1-2023.Rmd\">R markdown<\/a><br \/>\n<\/li><br \/>\n<li>You may find this paper on not overinterpreting STRUCTURE results useful.<br \/> <a href=\"https:\/\/www.nature.com\/articles\/s41467-018-05257-7\">A tutorial on how not to over-interpret STRUCTURE and ADMIXTURE barplots<\/a><br \/>\n<\/li><br \/>\n<\/ul><\/td>\n<\/tr>\n<tr class=\"row-5 odd\">\n\t<td class=\"column-1\">19 September<\/td><td class=\"column-2\">Exploring natural selection<\/td><td class=\"column-3\"><ul><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Lab-2023-09-19.nb.html\">HTML<\/a><\/li><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Lab-2023-09-19.Rmd\"><tt>R<\/tt> Markdown<\/a><\/li><br \/>\n<\/ul><\/td>\n<\/tr>\n<tr class=\"row-6 even\">\n\t<td class=\"column-1\">26 Septebmer<\/td><td class=\"column-2\">Exploring the properties of genetic drift<\/td><td class=\"column-3\"><ul><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Lab-2023-09-26.nb.html\">HTML<\/a><\/li><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Lab-2023-09-26.Rmd\"><tt>R<\/tt> Markdown<\/a><\/li><br \/>\n<\/ul><\/td>\n<\/tr>\n<tr class=\"row-7 odd\">\n\t<td class=\"column-1\">3 October<\/td><td class=\"column-2\">Drift with migration and mutation<\/td><td class=\"column-3\"><ul><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Lab-2023-10-03.nb.html\">HTML<\/a><\/li><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Lab-2023-10-03.Rmd\"><tt>R<\/tt> Markdown<\/a><\/li><br \/>\n<\/ul><\/td>\n<\/tr>\n<tr class=\"row-8 even\">\n\t<td class=\"column-1\">10 October<\/td><td class=\"column-2\">Exploring the coalescent<\/td><td class=\"column-3\"><ul><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Lab-2023-10-10.nb.html\">HTML<\/a><\/li><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Lab-2023-10-10.Rmd\"><tt>R<\/tt> Markdown<\/a><\/li><br \/>\n<\/ul><\/td>\n<\/tr>\n<tr class=\"row-9 odd\">\n\t<td class=\"column-1\">17 October<\/td><td class=\"column-2\"><div class=\"project\">Project # 2<\/div><\/td><td class=\"column-3\"><ul><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Project-2-2023.nb.html\">HTML<\/a><br \/>\n<\/li><br \/>\n<li><br \/>\n <a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Project-2-2023.Rmd\">R markdown<\/a><br \/>\n<\/li><br \/>\n<\/ul><\/td>\n<\/tr>\n<tr class=\"row-10 even\">\n\t<td class=\"column-1\">24 October<\/td><td class=\"column-2\">Comparing expected coalescent times to observed coalescent times<\/td><td class=\"column-3\"><ul><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Lab-2023-10-24.nb.html\">HTML<\/a><\/li><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Lab-2023-10-24.Rmd\"><tt>R<\/tt> Markdown<\/a><\/li><br \/>\n<\/ul><\/td>\n<\/tr>\n<tr class=\"row-11 odd\">\n\t<td class=\"column-1\">31 October<\/td><td class=\"column-2\">Tajima's D<\/td><td class=\"column-3\"><ul><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Lab-2023-10-31.nb.html\">HTML<\/a><\/li><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Lab-2023-10-31.Rmd\"><tt>R<\/tt> Markdown<\/a><\/li><br \/>\n<\/ul><\/td>\n<\/tr>\n<tr class=\"row-12 even\">\n\t<td class=\"column-1\">7 November<\/td><td class=\"column-2\"><div class=\"project\">Project #3<\/div><\/td><td class=\"column-3\"><ul><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Project-3-2023.nb.html\">HTML<\/a><\/li><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Project-3-2023.Rmd\"><tt>R<\/tt> Markdown<\/a><\/li><br \/>\n<\/ul><\/td>\n<\/tr>\n<tr class=\"row-13 odd\">\n\t<td class=\"column-1\">14 November<\/td><td class=\"column-2\">Resemblance among relatives and partitioning phenotypic variance<\/td><td class=\"column-3\"><ul><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Lab-2023-11-14.nb.html\">HTML<\/a><\/li><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Lab-2023-11-14.Rmd\"><tt>R<\/tt> Markdown<\/a><\/li><br \/>\n<\/ul><\/td>\n<\/tr>\n<tr class=\"row-14 even\">\n\t<td class=\"column-1\">21 November<\/td><td class=\"column-2\"><div class=\"project\">Thanksgiving break<\/div><\/td><td class=\"column-3\"><div class=\"project\">No Lab!<\/div><p>Did you think I was going  to make a lab assignment on Thanksgiving Break?<\/p><\/td>\n<\/tr>\n<tr class=\"row-15 odd\">\n\t<td class=\"column-1\">28 November<\/td><td class=\"column-2\">GWAS - initial analysis<\/td><td class=\"column-3\">Yes, I posted this lab Wednesday evening before Thanksgiving, but that doesn't mean you need to look at it now. You can wait until Monday morning, when I send you an email about it.<br \/>\n<br \/>\n<ul><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Lab-2023-11-28.nb.html\">HTML<\/a><\/li><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Lab-2023-11-28.Rmd\"><tt>R<\/tt> Markdown<\/a><\/li><br \/>\n<\/ul><\/td>\n<\/tr>\n<tr class=\"row-16 even\">\n\t<td class=\"column-1\">5 December<\/td><td class=\"column-2\">GWAS - consolidated analysis and interpretation of the results<\/td><td class=\"column-3\"><ul><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Gypsymoth-GWAS-results.nb.html\">HTML<\/a><\/li><br \/>\n<li><br \/>\n<a href=\"https:\/\/darwin.eeb.uconn.edu\/eeb348-resources\/Gypsymoth-GWAS-results.Rmd\"><tt>R<\/tt> Markdown<\/a><\/li><br \/>\n<\/ul><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n\n","protected":false},"excerpt":{"rendered":"","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-96","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/pages\/96","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/comments?post=96"}],"version-history":[{"count":0,"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/pages\/96\/revisions"}],"wp:attachment":[{"href":"https:\/\/darwin.eeb.uconn.edu\/uncommon-ground\/eeb348\/wp-json\/wp\/v2\/media?parent=96"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}