December 2009 Archives

Dr. Seuss in Copenhagen

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But as I've written before:

We don't need to wait for a global agreement to begin reducing greenhouse gas emissions now. Those who take the lead now will not only show the way for those who follow, they will reap the benefits of being the ones who develop the technology -- and the jobs that come with it. Tom Friedman has been making this point for a long time. It's past time we started listening.
I'm no expert, of course, but in addition to the sources quoted in that post, there are other experts who agree.

So, yes, Copenhagen was disappointing, but let's not wallow in self-pity. Let's get off our duffs and start reducing greenhouse gas emissions now.

Where's the beef?

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Several days ago Louis Hoofstettler pointed to an article in American Thinker by David H. Douglass and John R. Christy, A Climatology Conspiracy? The article describes (a) the publication history of two articles in the International Journal of Climatology and (b) e-mail correspondence among authors of the second article. The first article is by Douglass, Christy, Benjanmin D. Pearson, and S. Fred Singer (Douglass et al.). The second is by Benjamin Santer and 16 co-authors. Both appeared in the November 2008 issue (Santer et al.).

Douglass and Christy present the events involving publication of these papers as evidence of a conspiracy among leading climatologists to suppress dissenting viewpoints. I am not a climatologist. I cannot evaluate the arguments for or against including data from RABOCORE v1.3 and v1.4 in an analysis of temperature trends in the tropical troposphere. I know a fair about statistics and probably could say something about the statistical dispute, but that's a technical issue and it doesn't seem to be Douglass and Christy's primary complaint. Instead, they're concerned about the publication process and the possibility that impartial peer review has been subverted. That I can say a little about, based on the description by Douglass and Christy and supplemented by a little investigation of my own.

My conclusion? It strikes me as a little odd that Santer et al. was not published as a response to Douglass et al., but if the evidence Douglass and Christy present is all they can muster for a conspiracy, I'm left asking, "Where's the beef?".

For details, click through.

Best bugs of 2009

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eucharitid-wasp.jpg
Eucharitid wasp, by Rundstedt B. Rovillos, via Myrmecos
Myrmecos posted his selection of the best insect photographs he encountered on the web in 2009. The Eucharitid wasp at the left is just one example. Head over and see them all for yourself.

I am in awe of the skill these photographers show and of the beauty found in such small packages.

Hat tip: Carl Zimmer.

More reactions to Copenhagen

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I've blogged a lot about climate change, but I'm no expert -- either in climate science or in public policy. So there's not much reason to listen to me when I suggest that "[w]e don't need to wait for a global agreement to begin reducing greenhouse gas emissions now." But there are people who know a lot about public policy who have come to the same conclusion. I mentioned a couple in my earlier post. Here are two more.

The first is an excerpt from a long post analyzing the Copenhagen Accord by Robert Stavins, Director of the Harvard Environmental Economics Program, and Chairman of the Environment and Natural Resources Faculty Group at Harvard.

The climate change policy process is best viewed as a marathon, not a sprint.  The Copenhagen Accord - depending upon details yet to be worked out - could well turn out to be a sound foundation for a Portfolio of Domestic Commitments, which could be an effective bridge to a longer-term arrangement among the countries of the world.  We may look back upon Copenhagen as an important moment - both because global leaders took the reins of the procedures and brought the negotiations to a fruitful conclusion, and because the foundation was laid for a broad-based coalition of the willing to address effectively the threat of global climate change.  Only time will tell.
The second is an excerpt from an essay about the Copenhagen Accord by David Doniger, Policy Director for the Natural Resources Defense Council.

The Copenhagen climate deal that President Obama hammered out Friday night with the leaders of China, India, Brazil and South Africa broke through years of negotiating gridlock to achieve three critical goals.  First, it provides for real cuts in heat-trapping carbon pollution by all of the world's big emitters.  Second, it establishes a transparent framework for evaluating countries' performance against their commitments.  And third, it will also start an unprecedented flow of resources to help poor and vulnerable nations cope with climate impacts, protect their forests, and adopt clean energy technologies.

...

So give up the sour and grudging reviews.  The Copenhagen Accord is a significant breakthrough that signals a new era of effective cooperation between all major emitters, and opens the door to finally enacting U.S. climate and energy legislation next year. (emphasis added)

An expert speaks about climate change

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The Met Office (UK) recently solicited questions from the public on climate change and posted responses to those questions from Professor Julia Slingo, the Met Office's chief scientist. The questions were:

  • How do you know CO2 is responsible for the change in climate and can you prove it? And how do we know that CO2 released is from human activities?
  • Studies of past climate show temperatures rise first, then CO2 follows. How do we know that's not happening now?
  • Surely current warming is natural, as it has been in the past?
  • Can we rely on climate model predictions to tell us about the future?
  • Hasn't the Earth cooled recently and Arctic seaice recovered?
  • Why is global warming bad -- aren't there advantages?
  • What effect is there going to be on the Gulf Stream because of climate change and what would happen if it stopped?
  • Can we really stop climate change by cutting CO2 emissions?
  • What if we can't cut CO2? Is there anything else that can be done?
  • What can individuals do and what is the Government doing to prepare?
  • Does 'climategate' (hacking of data at the Climatic Research Unit at the University of East Anglia) undermine climate science in any way?
And the answers? You can read the transcript in a PDF, or click through for three YouTube videos. Each is a little less than 10 minutes long.

Reflections on Copenhagen

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First, let me admit that I've only skimmed agreement President Obama and other leaders reached last Friday, but my impression is much like that of folks at the EnergyCollective:

President Obama also reminded the world that a "legally binding" international climate agreement is not, in the end, legally binding anyway, while repudiating the notion that "Science" can dictate and bind national economic and political decision-making.

...

The framework of the deal appears to essentially be an agreement amongst major emitters to move forward with verifiable domestic actions to reduce carbon emissions and spur clean development, rejecting the abstract emissions targets and timetables that were the hallmark of the Kyoto protocol.
In other words, if1 the U.S., China, India, Brazil, and the E.U. follow through on their commitments, greenhouse gas emissions will be reduced -- not reduced enough to avoid devastating consequences for poor and low-lying countries, but reduced rather than increased, which is something.

So what do we do next? Simon Zadek argues persuasively that trying to "fix" Copenhagen through multilateral negotiations is the wrong approach. He argues that "[s]tudied history will point to Copenhagen as the last serious attempt to use 20th century techniques to arrange our 21st century affairs." I'll let Dan Drezner or other experts in international affairs assess his suggestion for restructuing systems of global governance, but his first suggestion is right on the mark. It takes Friday's small bet and raises the ante.

[D]eal with climate with the right people where the action is. Whilst not wishing to trivialize today's pain, we can deal with climate more effectively by catalyzing ambitious national action leveraged with international co-operation. We can get a better global deal, but only once nation's have whetted their appetite for low carbon growth and development through action, not theory. This is not, as i have repeatedly argued, downgrading expectations, but upgrading them by leveraging where the real energy for change lies, and then uploading the results into a far smarter global deal going forward.
We don't need to wait for a global agreement to begin reducing greenhouse gas emissions now. Those who take the lead now will not only show the way for those who follow, they will reap the benefits of being the ones who develop the technology -- and the jobs that come with it. Tom Friedman has been making this point for a long time. It's past time we started listening.

The future for Andy Revkin

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Yesterday was Andy Revkin's last day at the New York Times. I'll miss his reporting, but he has exciting plans for his new position at Pace University's Academy for Applied Environmental Studies. Go read the whole column to see what his plans are. Here's a taste of what you'll find.

Among other goals, I want to help make scientists and scientific institutions into  better, more committed, more creative communicators. In a world of  shrinking specialized journalism, direct outreach will be more vital than ever.
I'm putting words into his mouth here, but as I read it, Revkin sees the demise of traditional journalism as an opportunity for direct outreach. If he's right, and he probably is, it means that it will be even more vital for those of us in the trenches to reach out directly to a broad publc not only to share the fruits of scientific research but also to share its wonder and beauty.

ClimateCrock on Climategate -- Part 2

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Why biodiversity matters

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The PBS NewsHour broadcast an excellent segment on the importance of biodiversity on Friday night. Here it is. It's a little over 10 minutes long,1 but it's well worth watching the whole thing. Enjoy!

Here's a brief excerpt from the transcript:

PAUL SOLMAN: So, what's the deal with the polar bear?

DR. ERIC CHIVIAN: Well, polar bears have become the iconic symbol of what we are going to lose with climate change. But their medical value is almost never mentioned. Let me tell you about that. For five to seven months, they go into hibernation. If we were bed-ridden for five months, we would lose a third of our bone mass. They have substances in their blood that prevent them from losing bone, even though they are not moving around. If we understood what those substances were, which we don't, we might be able to treat and maybe even prevent osteoporosis, which kills 70,000 Americans every year, costs the U.S. economy $17 billion.

A word I'll have to remember

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I'm grading papers from my Conservation Biology course this afternoon, and one of my students used a word I hadn't encountered before. It's a word that I'll have to remember, because I've encountered many situations where it would be useful (from Dictionary.com).

pan⋅chres⋅ton

[pan-kres-tuhn] Show IPA
-noun
a proposed explanation intended to address a complex problem by trying to account for all possible contingencies but typically proving to be too broadly conceived and therefore oversimplified to be of any practical use.

Origin:
1625-35; < Gk pánchrēston, neut. of pánchrēstos good for everything, equiv. to pan- pan- + chrēs-, verbid s. of chrâsthai to be useful + -tos v. adj. suffix

Climategate -- a summary from FactCheck.org

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From FactCheck.org. Go there to read the whole thing.


Summary

In late November 2009, more than 1,000 e-mails between scientists at the Climate Research Unit of the U.K.'s University of East Anglia were stolen and made public by an as-yet-unnamed hacker. Climate skeptics are claiming that they show scientific misconduct that amounts to the complete fabrication of man-made global warming. We find that to be unfounded:

  • The messages, which span 13 years, show a few scientists in a bad light, being rude or dismissive. An investigation is underway, but there's still plenty of evidence that the earth is getting warmer and that humans are largely responsible.
  • Some critics say the e-mails negate the conclusions of a 2007 report by the Intergovernmental Panel on Climate Change, but the IPCC report relied on data from a large number of sources, of which CRU was only one.
  • E-mails being cited as "smoking guns" have been misrepresented. For instance, one e-mail that refers to "hiding the decline" isn't talking about a decline in actual temperatures as measured at weather stations. These have continued to rise, and 2009 may turn out to be the fifth warmest year ever recorded. The "decline" actually refers to a problem with recent data from tree rings.

Kim Cobb on Climategate

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Kim Cobb is an assistant professor in the School of Earth and Atmospheric Sciences at the Georgia Institute of Technology. Here's a little of what he has to say about Climategate:

There is no doubt that the CRU e-mails are an embarrassment to climate science in general, and to paleoclimate in particular. I have read the "greatest hits", and cringe along with everyone else at their content. But in my professional opinion, these e-mails reveal nothing more than brief, emotion-fueled remarks made in the face of unrelenting and often disingenuous attacks. Far more importantly, the conduct (questionable or not) of a handful of climate scientists in no way undermines the scientific support for anthropogenic global warming. The conclusions reached in the IPCC report do not critically depend on the work of these few scientists.

One of the more unnerving impressions from the behind-the-scenes glance at climate research may be that subjectivity exists in climate science. My response is "Well, duh." Scientists are not technicians, we are not following a cookbook or a yellow-brick-road. Rather, we make a myriad of decisions every day about our results, based on our interpretations, which in turn are based on (in this case) years of experience. Some aspects of climate science are more open to subjective interpretation than others (the standardization of some late 20th century tree ring paleoclimate records being near the top of this list). If a subjective choice changes the conclusion of a study, then the confidence in the conclusion is reduced and the associated uncertainties must be quantified. But the scientific process is self-correcting; if an inappropriate choice was made, then this will eventually be identified by other researchers, our scientific understanding will improve, and our confidence in the conclusions will increase.

Read the whole set of comments at RealClimate.

Mendel gets complicated

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ResearchBlogging.orgOne of the principles we teach in introductory biology is that in diploids the relationship between genotype and phenotype depends only on the alleles that an individual carries, not on the parent from which it inherited those alleles. For example, if I have an A allele and a B allele at the locus determining blood type, I'll have type AB blood regardless of whether I got the A from my mom or my dad.1 We know of exceptions -- genomic imprinting --, but we've tended to think of them as fairly rare. Or at least I've tended to think of them as fairly rare.

I may need to rethink that now.

In this week's Nature Augustine Kong and his collaborators report that the association between genotype and phenotype at seven different loci in humans depends on which allele came from which parent. In particular, the allele associated with increased risk of type II diabetes at one locus if the allele is inherited from the father is associated with decreased risk if inherited from the mother.2 The loci identified all appear to be found in genomic regions where there's a lot of imprinting, so maybe I shouldn't be surprised. But still. It's a little unnerving to think how complicated genetics can sometimes be.3

Michael Mann on Climategate

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We heard from Mike Hulme of the University of East Anglia a couple of weeks ago. Today Michael Mann from Pennsylvania State University adds his perspective in the Washington Post.1

I cannot condone some things that colleagues of mine wrote or requested in the e-mails recently stolen from a climate research unit at a British university. But the messages do not undermine the scientific case that human-caused climate change is real. (emphasis added)

...

The scientific consensus regarding human-caused climate change is based on decades of work by thousands of scientists around the world. The National Academy of Sciences has concluded that the scientific case is clear. As world leaders work in Copenhagen to try to combat this problem, some critics are seeking to cloud the debate and confuse the public.

A climate scientist on the state of climate science

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B. D. Santer is Research Scientist in the Program for Model Diagnosis and Intercomparison at the Lawrence Livermore National Laboratory. The Program was founded in 1989. Rabbett Run posts on open letter from him to the climate science community. Here's part of what he has to say:

As climate scientists, this is what we know with great confidence:

  • We know that human activities have changed the levels of greenhouse gases in the atmosphere.
  • We know that these changes in the composition of the atmosphere have had profound effects on Earth's climate.
  • We know that the human "fingerprint" on climate will become ever more visible over the next few decades, and will impact many aspects of our lives.
  • We know that we are at a crossroads in human history. The decisions our political leaders reach in Copenhagen - or fail to reach - will shape the world inherited by future generations.

Author IDs

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Many of us are now familiar with DOIs (digital object identifiers):

The Digital Object Identifier (DOI®) System is for identifying content objects in the digital environment. DOI® names are assigned to any entity for use on digital networks. They are used to provide current information, including where they (or information about them) can be found on the Internet. Information about a digital object may change over time, including where to find it, but its DOI name will not change. (source)
I use them extensively in my graduate courses to link to papers in the primary literature. They're a way of ensuring that the links that worked when I first found them will continue to work for the foreseeable future.

Now there's a project to develop author IDs that would serve the same purpose for authors.

The Open Researcher and Contributor ID (ORCID) would be an alphanumeric string that uniquely identifies an individual scientist in much the same way that a Digital Object Identifier uniquely identifies a paper, book or other scholarly publication (more details and the complete list of participants will soon be available at http://www.orcid.org). The system would distinguish between the world's multitudinous Dr Smiths and Professor Wangs, but would not be affected by name changes, cultural differences in name order, inconsistent first-name abbreviations or the use of different alphabets. It would be attached to researchers' journal publications, and could also be assigned to data sets they helped to generate, comments on their colleagues' blog posts or unpublished draft papers, edits of Wikipedia entries and much else besides. (source)
It's an intriguing idea. What's even more intriguing is that the editors of Nature suggest that an electronically updated record of research contributions would go far beyond the list of papers and books on a typical academic CV. They suggest that future hiring and promotion committees might begin to consider the vital contributions that people make to completion of projects (like a reference version of the human genome) that aren't likely to result in many traditional publications. 

Evolution rap

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Stanford students inspired by a field trip to the Galapagos Islands led by Bill Durham.1

Ocean acidification and biological diversity

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I mentioned Jane Lubchenco's testimony on ocean acidification a few days ago. On Monday the Secretariat of the Convention on Biodiversity released a report on the impacts of ocean acidification on marine biodiversity (press release, full report).

Among other findings, the study shows that increasing ocean acidification will mean that by 2100 some 70% of cold water corals, a key refuge and feeding ground for commercial fish species, will be exposed to corrosive waters.  In addition, given the current emission rates, it is predicted that the surface water of the highly productive Arctic Ocean will become under-saturated with respect to essential carbonate minerals by the year 2032, and the Southern Ocean by 2050 with disruptions to large components of the marine food source, in particular those calcifying species, such as foraminifera, pteropods, coccolithophores,
mussels, oysters, shrimps, crabs and lobsters, which rely on calcium to grow and mature.  

More on Revkin's departure

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I mentioned earlier that Andy Revkin is leaving the New York Times. A story in the Columbia Journalism Review indicates that he's accepting a buyout as part of the paper's latest round of layoffs.

Andrew C. Revkin, one of the most influential and respected reporters on the environment, will take a buyout from The New York Times as part of the paper's current round of budget cuts. His departure, after nearly fifteen years at the Times, is sure to leave a big hole in the publication's coverage of climate change at a time when this controversial issue--and what to do about it--is at the top of the American and international agenda as never before. Revkin is currently on assignment covering the Copenhagen climate change summit and will step down from his staff reporting post next Monday after returning to New York.

Here's how he explains his decision:

"I need to do more synthesis. I haven't had time for years," said Revkin, adding that he has been thinking of making a shift toward academia for the last two years. Since joining the Times in 1995, his front-line reporting on climate change has often led the way for national and international coverage of the issue. In a career spanning more than 25 years, Revkin has become one of the most versatile, prolific and pioneering multimedia science journalists covering all aspects of the environment, from basic science to rough-and-tumble policy and politics.

On a personal level, he said that 2009 "has been the hardest year I've experienced on this beat," including virtually around-the-clock coverage for both the print edition and his blog. Moreover, Revkin has increasingly found himself--and his paper's coverage--the target of critics on both the right and the left, particularly in the often vitriolic blogosphere. He described himself as "an advocate for scientific reality," not for either side of the debate. "The stakes are clearly higher now," Revkin said, "[it's] jaw-dropping to see how far things can go."

He will keep DotEarth going, but losing him as a full time reporter at the Times is more evidence of the decline in our nation's newspapers.1 I wish Revkin all the best, and I look forward to the books he promises to write, but I will greatly miss seeing his by-line in the TimesCJR concludes its story with these words:

Revkin will undoubtedly remain a strong influence in the field, and one can only hope that others journalists will continue to cover climate change as assiduously as he has.

We can only hope.

Andy Revkin leaving the New York Times

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I've referred to Andy Revkin's work in the New York Times frequently. I've found his reporting on the environment and climate extremely valuable. So you can imagine how sorry I was to read this on the Yale Forum on Climate and the Environment blog yesterdy:

Science writer Andrew C. Revkin, the individual journalist most identified with reporting on climate change, is leaving The New York Times. His last day will be December 21, and he will affiliate with Pace University. He is expected to continue working on his popular Dotearth blog through The Times, though details are still being arranged.

Revkin's move has been in the works for some time, and he says he decided some two years ago - after writing a "next 20 years" personal memorandum about his career plans - that he would leave journalism. He cites frustration with journalism and also personal fatigue after routinely working virtually 24/7 in recent years.

Forum on public access to federally funded research

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From the blog of the Office for Science and Technology Policy:

OSTP to Launch Public Forum to Discuss Options for Improving Public Access to Results of Federally Funded Research

On Thursday, Dec. 10, OSTP will launch a public consultation on Public Access Policy. The Administration is seeking public input on access to publicly-funded research results, such as those that appear in academic and scholarly journal articles. Currently, the National Institutes of Health require that research funded by its grants be made available to the public online at no charge within 12 months of publication. The Administration is seeking views as to whether this policy should be extended to other science agencies and, if so, how it should be implemented.

The Office of Science and Technology Policy in the Executive Office of the President and the White House Open Government Initiative is launching a "Public Access Policy Forum" to invite public participation in thinking through what the Federal government's policy should be with regard to public access to published federally-funded research results. To that end, OSTP will conduct an interactive, online discussion beginning Thursday, December 10. We will focus on three major areas of interest:

  • Implementation (Dec. 10 to 20): Which Federal agencies are good candidates to adopt Public Access policies? What variables (field of science, proportion of research funded by public or private entities, etc.) should affect how public access is implemented at various agencies, including the maximum length of time between publication and public release?
  • Features and Technology (Dec. 21 to Dec 31): In what format should the data be submitted in order to make it easy to search and retrieve information, and to make it easy for others to link to it? Are there existing digital standards for archiving and interoperability to maximize public benefit? How are these anticipated to change.
  • Management (Jan. 1 to Jan. 7): What are the best mechanisms to ensure compliance? What would be the best metrics of success? What are the best examples of usability in the private sector (both domestic and international)? Should those who access papers be given the opportunity to comment or provide feedback?

Each of these topics will form the basis of a blog posting that will appear at www.whitehouse.gov/open and will be open for comment on the OSTP blog.

We want your input!

For full details, see the Federal Register notice.

Monday pen -- the final episode

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In September I mentioned that I like fountain pens. Karina (of Aspiring Ecologist) suggested that I post a pen of the week. I took her up on her suggestion and made my first Monday pen post on the 21st of September. For the last three months I've been featuring another pen from my collection every Monday. 1 There are still two or three that I could write about, an inexpensive Waterman, a Stipula with a titanium nib and a clear reservoir section, and a sterling silver Levenger that I mentioned in passing once before. But to write about any of those, I'd have to get out my camera and take my own photograph. I've decided not to bother with that. They're nice pens, but they're not that special.

So my Monday pen series is coming to a close. If I see particularly striking pens in my Fahrney's catalog or elsewhere, I'll mention them. But pen posts will be very infrequent from now on.

Climategate, the enviornment, academics (including tuition increases), and the like should provide me with plenty of material.

The Climate Scoreboard -- update

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As of 4:40pm EST today, the Climate Scoreboard reads 3.9°C. In other words, pledges so far made at the climate conference in Copenhagen are sufficient to lead to a 3.9°C increase in global mean temperature by 2100. You read that right, a 3.9°C increase. Let's hope that for the sake of Tuvalu and other low-lying nations, and for ourselves, negotiators do much better than that in the end.1

Ocean acidification

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A video from testimony given by Jane Lubchenco, Administrator of the National Oceanic and Atmospheric Administration, at a hearing on 2 December on the State of Climate Science. Total time for the two videos is 15 minutes. Not only does Lubchenco explain the concepts very well, she demonstrates them with two simple experiments. In addition, a video showing the increase in acidification projected through 2100 under a "business as usual scenario" is very, very sobering.

The basic economics of carbon permits versus carbon taxes

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From dianewarth on ScribdThe Basic Economics of Carbon Permits Versus Carbon Taxes

You can also download a PDF version of the explanation.

Science-gate

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You've heard of Climategate. Well, Mark Fiore at SF Gate has revealed an even deeper conspiracy, Science-gate. Follow that link to see what he's found on the SF Gate site, or click through to see it here.

Statement from the UK science community

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From the UK Met Office. The statement is signed by more than 1700 scientists, and the signatures were gathered in only four days. The Met Office is also predicting that 2010 will be warmer than 2009 and that it could be "the warmest year in the instrumental record."

10 December 2009

We, members of the UK science community, have the utmost confidence in the observational evidence for global warming and the scientific basis for concluding that it is due primarily to human activities. The evidence and the science are deep and extensive. They come from decades of painstaking and meticulous research, by many thousands of scientists across the world who adhere to the highest levels of professional integrity. That research has been subject to peer review and publication, providing traceability of the evidence and support for the scientific method.

The science of climate change draws on fundamental research from an increasing number of disciplines, many of which are represented here. As professional scientists, from students to senior professors, we uphold the findings of the IPCC Fourth Assessment Report, which concludes that 'Warming of the climate system is unequivocal' and that 'Most of the observed increase in global average temperatures since the mid-20th century is very likely due to the observed increase in anthropogenic greenhouse gas concentrations'.

56 newspapers, 45 countries, 1 editorial

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editorial-header.pngEditorial-logo-001.jpg
The Guardian published the above editorial in its Monday edition. Click through to read it here, or click on The Guardian link to read it on the Guardian's web site.

Judith Curry on Climategate

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From NPR's Weekend Edition last Sunday. See also Judith Curry's open letter to graduate students and young scientists at Climate Progress.


Crock of the week on Climategate

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Monday Pen

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lalex-forme-triangle.png Frankly, I've been a little disappointed in this one. It's a beautiful pen. Its triangular shape keeps it where it is when I lay it down on the desk, the color is striking, and it writes smoothly. I bought it when I was in Cape Town last spring working on white proteas. I walked past the pen store early in my visit and saw it in the window. I walked by again a couple of days before I left, walked in to take a closer look, and left with a Lalex Forme Triangle and a box of cartridges.1

It has a firm stainless-steel nib, and I expected to use it a lot as my meeting pen when I returned to the States, but that's not how it worked out.

I had it in my shirt pocket on the flight from Cape Town through Dakar to Atlanta. Somewhere between Cape Town and Atlanta the cap unscrewed. I now have a nice ink spot in the pocket of the shirt I was wearing that day.2 OK. Well, that can happen to any pen once, I figured. I'll just make sure I have the cap screwed on more securely the next time. I put it in my pocket one day soon after that before I went in to work, and I made sure the cap was screwed on securely. By the time I arrived at my office, it had jiggled loose. Fortunately, this time I noticed before I had an ink stain on my shirt. I should probably give it another chance, but I've hardly used it since then. Maybe I just have a bad example, but I'll think carefully before adding another Lalex to my collection. Too bad because as you can see it is a very striking pen.

Interestingly, this is one that Fahrney's doesn't carry. But you can find it at Airline International. Here's what they have to say about it.

The design for this collection is inspired by 3 of the simplest, and at the same time more symbolic forms: circle, triangle and square, and is the result of an in depth study that Lalex 1938 carried out defying all laws of mathematics and solid geometry, and achieving truly amazing results. In pearlised resin, with aluminum trim, the "Forme" collection is available as fountain pen with iridium-tipped stainless steel nibs, capped rollerball, ball pen and mechanical pencil available in the "viaggio" (travel) and "scrivania" (desk) style.

More thoughts on climategate

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I'm glad I waited a bit to say more about Climategate, because Matt Nisbet just made some of the same points I was going to make. The difference is, Matt's a communication scientist so he knows what he's talking about.

Reaction to the content of the East Anglia emails is so intense because it shows scientists talking and behaving in ways that cut against the stereotypical image of impartial, Vulcan-like high priests of reason.

That's right. The e-mails show, among other things, that scientists are human, subject to the same foibles and weaknesses as everyone else. What's different about science is that it's a process -- a community process. The success or failure of a scientific idea doesn't depend on how popular a scientist is. It depends on how convincing the data and the arguments are. It's the consilience of the data produced by the East Anglia group with data produced by many other groups working independently and with many different types of data that make the data and their interpretation credible.

Climategate resonates so strongly because so few people understand just how broad the consensus is and how many independent pieces of data point in the same direction. They don't understand the process of science, because they've never been exposed to it. They've been told what scientists know, not how we came to know it.

Matt suggests developing a new type of course for college students, one that

would introduce students to quality online news sources about science, teach students about how to constructively use participatory tools such as blogs and other social media applications, educate students on how to critically evaluate evidence and claims as presented in the media, introduce students to the relationships between science and institutions as they are often covered in the news, and socialize students into enjoying and following science by way of digital media after they complete their formal science coursework. In short, this type of media literacy curriculum would not only potentially grow the audience for science media, but also impart the skills, motivation, and know-how that students need to be participatory citizens in the online and real worlds.
I agree. Except I'd give it a bit more of a philosophical bent and include some discussion of the process of science and how the community of scientists develop reliable knowledge through peer review and challenging one another's ideas. It's more important for non-science students to know how to interpret news reports of scientific findings, to be able to judge when the results are just from one study and when they represent the considered judgment of a broader community,  and to make informed decisions about scientific and technical issues as citizens than it is for them to memorize the details of the Krebs cycle.

Jon Stewart on Climategate

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Jon Stewart gets it. He understands that the hacked e-mails don't diminish our confidence in the science of global warming. They do provide an easy target for those who've never understood and never accepted the science. I'm still trying to figure out what to say about this whole mess,1 and when -- if -- I do. I'll be sure to share it here.

The climate scoreboard

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The Climate Scoreboard uses the C-ROADS simulation to calculate the long-term climate impacts of proposals under consideration in the negotiations to produce a global climate treaty. Embedded Scoreboards automatically update as the deal improves.
Head over to The Climate Scoreboard for more information.

Climategate

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I haven't said much about Climategate, because anything I might have said has been said better by people who know more about climate science than I. It is clearer now than it was even a few days ago that this scandal has legs. Yesterday John Holdren and Jane Lubchenco were raked over the coals in a hearing of the House of Representatives Select Committee on Energy Independence and Global Warming.

Ranking member James Sensenbrenner (R-WI) led the assault, attacking John Holdren, the president's science adviser. Sensenbrenner, a former chair of the House Science committee, quoted an e-mail from 2003 in which Holdren called scientists Willie Soon and Sallie Baliunas "amateurs" at interpreting climate data and said that their findings are "flawed." (source)
There's a lesson in here for any scientist involved in research with policy implications, whether it's climate change, stem cells, nanotechnology, or conservation.

[T]here's one thing we all must do: be true to the science. We have to be honest about what the data say, even if the data tell us things about the policy we'd prefer to adopt that we'd rather not hear. (source; take a look at this one too )

But don't take my word for it. Mike Hulme is a climate scientist at the University of East Anglia, and some of his e-mails are in the climatehack collection. Here's a little of what he wrote in an op-ed in the Wall Street Journal yesterday.

Climate scientists, knowingly or not, become proxies for political battles. The consequence is that science, as a form of open and critical enquiry, deteriorates while the more appropriate forums for ideological battles are ignored.

...

The problem then with getting our relationship with science wrong is simple: We expect too much certainty, and hence clarity, about what should be done. Consequently, we fail to engage in honest and robust argument about our competing political visions and ethical values.

...

The central battlegrounds on which we need to fight out the policy implications of climate change concern matters of risk management, of valuation, and political ideology.
Go read the whole thing. It's well worth your time.

A few thoughts on FRPAA

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Haven't heard of FRPAA? I'm not surprised. If you don't follow the business of scholarly publishing, I wouldn't expect you to have heard of it. FRPAA is the Federal Research Public Access Act (S. 1373): "A bill to provide for Federal agencies to develop public access policies relating to research conducted by employees of that agency or from funds administered by that agency." The act directs federal agencies to develop a research public access policy that will provide for, among other things, "free online public access to such final peer-reviewed manuscripts or published versions as soon as practicable, but not later than 6 months after publication in peer-reviewed journals."

A week and a half ago the Presidents of six public universities in New England signed a letter of support for the bill. In their letter to Senators Lieberman and Cornyn, the Presidents pointed out that

Dissemination of results is an essential component of the land-grant tradition of research and of our investment in science. We share your concern that far too often the results of research funded by the U.S. government are not broadly available to researchers, scientists, and members of the public. In addition to ensuring that this research is made available quickly, it is also critical that the published information remain broadly available for future use. We are pleased to see that your bill is designed to support both early, as well as long-term, access to scientific research results.
I completely agree. I am, however, concerned by the provision of the bill requiring free online public access within 6 months of publication. As Judy Jernstedt, editor of the American Journal of Botany, and I wrote to Senators Lieberman and Cornyn in September, if federally funded research is available free of charge from an easily accessible and permanent repository after only 6 months, personal and institutional subscriptions to journals publishing that research are likely to decline, and they may decline substantially. If they do, not-for-publishers, like the Botanical Society of America, will no longer be able to publish their journals and the results will be less public access to science, not more.

Like many not-for-profit publishers, the Botanical Society of America has already adopted policies that enhance public access to science. You can read the letter Judy and I sent on p. 146 of the December 2009 issue of the Plant Science Bulletin.1

Gambling on endangered species

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And I mean gambling literally. Eddie Game reports on a creative way to get people interested in endangered species and to get them interested in protecting them on land that they own. Here's a bit of his report. The "Hugh" referred to is Hugh Possingham, a conservation biologist at the University of Queensland.

Australians love gambling. It's a well-accepted fact that we'll wager a bet on just about anything. We even have public holidays just so we can bet on horse races. So why not take this socially damaging propensity and use it for good?

Hugh's proposal goes as follows:

  • Put the name of each Australian threatened and endangered species in a lottery barrel.
  • Each year right before the Melbourne Cup, Australia's biggest horse race, get the environment minister (currently ex-Midnight Oil frontman Peter Garrett) to spin the barrel and draw out a species name.
  • Whatever proportion of that species' population lives on a piece of land, the owner of that land - be it a private individual, an indigenous group, an NGO, a corporation, or even a state government - receives the equivalent proportion of $20 million - less than 0.4% of annual gambling revenue in Australia.
  • Have the winning species, along with facts about it and where it lives, published on the front page of Australian papers along with the Melbourne Cup-winning racehorse.

This scheme would provide the incentive for landowners not just to protect but actively enhance populations of threatened species on their properties.

Cultural evolution and music

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Evolution is undoubtedly the explanation for the diversity of life, and evolution by natural selection is undoubtedly responsible for the close fit between organisms and their environment. The remarkable thing about evolution by natural selection is that it has only very minimal requirements:

  1. "Offspring" tend to resemble their "parents".
  2. "Individuals" differ in many traits that affect how many "offspring" they leave.
Given just those two conditions it follows that traits that enhance the number of offspring an individual leaves will become more and more frequent. That's the process of evolution by natural selection.

Notice the scare quotes around "offspring", "parents", and "individuals". That's because the process as I just described it applies to any thing, organism or not, that can be said to leave offspring that resemble themselves. Richard Dawkins long ago pointed out that there might be elements of culture, memes, that have these properties.

Now Bob McCallum and Armand Leroi have taken Dawkins at his word and set up an experiment to see whether they can "see" music evolve through evolution by natural selection. Read more and participate in the project at http://darwintunes.org. In the meantime, take a look at this video describing the project.

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