As promised (threatened?), I've posted the QTL problem. I'll need to show you two or three more things about QTL Cartographer before you can do the whole analysis, but if you'd like to download the data and make sure you can read it into QTL Cartographer, everything is available from the detail page for tomorrow's lecture.
Oh, one word of warning. Each analysis for composite interval mapping is going to take a long time. I started an analysis of the %N at 25°C data this morning around 10:00am, and it's still running. I mention this as a warning. You're going to want to start your analyses fairly soon, and you'll probably want to set them to run overnight. If CIL takes inordinately long, which I'll know by lecture tomorrow, we'll settle for an interval mapping analysis instead.
Oh, one word of warning. Each analysis for composite interval mapping is going to take a long time. I started an analysis of the %N at 25°C data this morning around 10:00am, and it's still running. I mention this as a warning. You're going to want to start your analyses fairly soon, and you'll probably want to set them to run overnight. If CIL takes inordinately long, which I'll know by lecture tomorrow, we'll settle for an interval mapping analysis instead.
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